- Predicted Gene MLOC_36980
MLOC_36980 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 71.5844 | 61.4909 | 76.4753 | 58.7788 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 46.3822 | 39.3719 | 40.1344 | 32.4182 |
| INF1 | Young developing inflorescences (5mm) | 30.972 | 30.5712 | 30.5795 | 22.1985 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.9466 | 15.7417 | 17.5712 | 14.8884 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 50.6143 | 41.7881 | 43.8046 | 44.7373 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 52.9966 | 48.1607 | 51.0412 | 148.59 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 33.7206 | 36.1804 | 34.8065 | 28.7419 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.21228 | 6.52837 | 9.49504 | 14.9084 |
CDS Structure of MLOC_36980
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_36980.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g32230.1 |
+1 |
0.0 |
562 |
274/300 (91%) |
13107.m03259 protein domain of unknown function domain containing protein, expressed |
| TAIR PP10 |
AT4G21570.1 |
+1 |
2e-161 |
462 |
219/293 (75%) |
Protein of unknown function (DUF300) | chr4:11471126-11472269 REVERSE LENGTH=294 |
