MLOC_36976 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.09462770.05761320.03595690.0617276
LEAShoots from the seedlings (10 cm shoot stage)0.6305010.2613450.215110.288066
INF1Young developing inflorescences (5mm)0.04057350.09852410.1509030.102452
INF2Developing inflorescences (1-1.5 cm)0.09158940.1566260.1049290.151352
ROORoots from the seedlings (10 cm shoot stage)00.036412800.156194
NODDeveloping tillers at six leaf stage, 3rd internode0.09878040.314450.4832470.951587
CAR5Developing grain, bracts removed (5 DPA)0.378280.3909680.4194220.421072
CAR15Developing grain, bracts removed (15 DPA)0.1410170.08571880.1507390.332206



CDS Structure of MLOC_36976






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36976.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353957NoneNoneNoneNone
MLOC_36976.1CUST_18014_PI427708080AvailableAvailablecontig_2547592 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g26950.1 +1 0.0 626 346/455 (76%) 13111.m02582 protein UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed
TAIR PP10 AT5G54060.1 +1 4e-81 265 170/469 (36%) | Symbols: UF3GT | UDP-glucose:flavonoid 3-o-glucosyltransferase | chr5:21936902-21938308 REVERSE LENGTH=468