MLOC_36965 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains677.462439.372463.191504.052
LEAShoots from the seedlings (10 cm shoot stage)242.997106.92112.165130.71
INF1Young developing inflorescences (5mm)147.77146.031125.276121.169
INF2Developing inflorescences (1-1.5 cm)92.0431105.94595.5598107.534
ROORoots from the seedlings (10 cm shoot stage)314.973216.404191.451258.978
NODDeveloping tillers at six leaf stage, 3rd internode322.662385.523188.1531041.62
CAR5Developing grain, bracts removed (5 DPA)192.987201.186228.028200.606
CAR15Developing grain, bracts removed (15 DPA)40.275739.515735.440289.5335



CDS Structure of MLOC_36965






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250247.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250247.1CUST_18818_PI427708080NoneNoneNone
MLOC_24649.1NoneAvailableNonecontig_165020 (Mapped)
MLOC_27383.1NoneAvailableNonecontig_182642 (Mapped)
MLOC_32595.1NoneAvailableNonecontig_2301155 (Not mapped)
MLOC_34412.1NoneAvailableNonecontig_2437876 (Not mapped)
MLOC_36225.1NoneAvailableNonecontig_2540357 (Not mapped)
MLOC_36965.2NoneAvailableAvailablecontig_2547568 (Mapped)
MLOC_41474.1NoneAvailableNonecontig_259010 (Mapped)
MLOC_41581.1NoneAvailableNonecontig_2596273 (Not mapped)
MLOC_51972.1NoneAvailableNonecontig_371952 (Not mapped)
MLOC_5620.1NoneAvailableNonecontig_1364635 (Not mapped)
MLOC_78155.1NoneAvailableNonecontig_789266 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----