MLOC_3692 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 27.5764 | 18.6421 | 22.6352 | 22.4175 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0.0612785 | 0.0558058 |
| INF1 | Young developing inflorescences (5mm) | 0.0839326 | 0 | 0.0345427 | 0.0521016 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0.0355386 | 0.0298615 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 71.5049 | 55.0288 | 52.9776 | 65.5033 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.49213 | 0.259192 | 0.0638715 | 0.55219 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0361005 | 0 | 0 | 0.033096 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_3692
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3692.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g24600.1 |
+3 |
2e-164 |
473 |
239/330 (72%) |
13101.m02600 protein fruit bromelain precursor, putative, expressed |
| TAIR PP10 |
AT5G45890.1 |
+3 |
6e-70 |
228 |
142/329 (43%) |
| Symbols: SAG12 | senescence-associated gene 12 | chr5:18613300-18614759 FORWARD LENGTH=346 |
