MLOC_36871 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains30.85634.214735.528135.8705
LEAShoots from the seedlings (10 cm shoot stage)27.427815.224517.184117.9554
INF1Young developing inflorescences (5mm)33.538433.335528.855927.9962
INF2Developing inflorescences (1-1.5 cm)24.025730.469127.305430.4875
ROORoots from the seedlings (10 cm shoot stage)29.725335.544230.186944.3996
NODDeveloping tillers at six leaf stage, 3rd internode15.428916.323214.412154.6333
CAR5Developing grain, bracts removed (5 DPA)63.403859.248259.924559.6005
CAR15Developing grain, bracts removed (15 DPA)17.048615.28713.82236.8591



CDS Structure of MLOC_36871






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36871.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360051NoneNoneNoneNone
MLOC_36871.1CUST_2324_PI427708080AvailableAvailablecontig_2547431 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g11720.1 +1 0.0 1651 811/891 (91%) 13103.m01325 protein glycosyl hydrolase, family 31, putative, expressed
TAIR PP10 AT5G63840.1 +1 0.0 1241 595/911 (65%) | Symbols: RSW3, PSL5 | Glycosyl hydrolases family 31 protein | chr5:25545056-25548922 FORWARD LENGTH=921