MLOC_36869 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1288750.2842790.06283410.207818
LEAShoots from the seedlings (10 cm shoot stage)5.081617.667159.766076.66794
INF1Young developing inflorescences (5mm)0.4680250.4499540.2642180.355602
INF2Developing inflorescences (1-1.5 cm)0.3141150.2129280.2837540.298716
ROORoots from the seedlings (10 cm shoot stage)00.2244130.369170.391449
NODDeveloping tillers at six leaf stage, 3rd internode2.099063.221974.0303811.3466
CAR5Developing grain, bracts removed (5 DPA)1.276371.743321.351541.48796
CAR15Developing grain, bracts removed (15 DPA)0.3418980.383080.3075040.858124



CDS Structure of MLOC_36869






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36869.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_36869.1NoneAvailableAvailablecontig_2547429 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g04074.1 +2 2e-139 402 219/422 (52%) 13110.m00327 protein retrotransposon protein, putative, unclassified, expressed
TAIR PP10 AT4G23160.1 +2 2e-67 205 135/395 (34%) | Symbols: CRK8 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | chr4:12129485-12134086 FORWARD LENGTH=1262