- Predicted Gene MLOC_36825
MLOC_36825 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.15543 | 3.54452 | 2.00433 | 3.23069 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.97125 | 1.66061 | 1.46201 | 1.63276 |
| INF1 | Young developing inflorescences (5mm) | 3.35649 | 4.04601 | 4.73681 | 3.46312 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.08996 | 2.6526 | 2.17725 | 2.64349 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.89901 | 1.09199 | 1.08796 | 1.18825 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.88928 | 3.02564 | 5.33565 | 10.1613 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.23596 | 2.06802 | 1.32562 | 1.59257 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.299765 | 0.305941 | 0.289687 | 0.734777 |
CDS Structure of MLOC_36825
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_36825.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g48050.1 |
+2 |
5e-143 |
416 |
222/292 (76%) |
13103.m05185 protein RNA methyltransferase, TrmH family protein, putative, expressed |
| TAIR PP10 |
AT4G38020.1 |
+2 |
2e-90 |
280 |
154/282 (55%) |
tRNA/rRNA methyltransferase (SpoU) family protein | chr4:17861568-17863010 FORWARD LENGTH=352 |
