- Predicted Gene MLOC_36811
MLOC_36811 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.60079 | 10.5205 | 9.32412 | 11.5026 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.83157 | 7.90149 | 8.86799 | 9.30633 |
INF1 | Young developing inflorescences (5mm) | 19.4245 | 20.6011 | 21.3259 | 20.4749 |
INF2 | Developing inflorescences (1-1.5 cm) | 26.2563 | 23.2877 | 25.1765 | 30.5354 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.75545 | 10.2837 | 10.1105 | 15.9444 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.05686 | 4.00321 | 5.82947 | 19.6718 |
CAR5 | Developing grain, bracts removed (5 DPA) | 15.4301 | 15.7163 | 14.4304 | 17.1474 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.31195 | 9.10375 | 10.2643 | 24.508 |
CDS Structure of MLOC_36811
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_36811.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g12800.1 |
+3 |
4e-137 |
409 |
266/314 (85%) |
13109.m01170 protein zinc finger Ran-binding domain-containing protein 2, putative, expressed |
TAIR PP10 |
AT1G50300.1 |
+3 |
2e-104 |
321 |
220/313 (70%) |
| Symbols: TAF15 | TBP-associated factor 15 | chr1:18628818-18631662 REVERSE LENGTH=372 |