MLOC_36794 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.272492.440572.728332.66245
LEAShoots from the seedlings (10 cm shoot stage)3.672171.129830.8825891.71731
INF1Young developing inflorescences (5mm)0.7513830.6302440.5010620.572627
INF2Developing inflorescences (1-1.5 cm)0.3789690.3742630.4512580.464051
ROORoots from the seedlings (10 cm shoot stage)2.564692.91862.195853.85127
NODDeveloping tillers at six leaf stage, 3rd internode3.644733.942760.042305212.106
CAR5Developing grain, bracts removed (5 DPA)1.714341.157351.634711.55825
CAR15Developing grain, bracts removed (15 DPA)0.4175380.5361890.3257961.08378



CDS Structure of MLOC_36794






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36794.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371594NoneNoneNoneNone
MLOC_36794.1CUST_2316_PI427708080AvailableAvailablecontig_2547343 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g24430.1 +2 0.0 1472 758/857 (88%) 13104.m02286 protein sucrose synthase, putative, expressed
TAIR PP10 AT1G73370.1 +2 0.0 1089 546/816 (67%) | Symbols: SUS6, ATSUS6 | sucrose synthase 6 | chr1:27584533-27588326 REVERSE LENGTH=942