- Predicted Gene MLOC_36790
MLOC_36790 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_36790_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_36790_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 16.8356 | 34.1436 | 32.1196 | 34.2648 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 29.1543 | 13.972 | 11.9396 | 16.7612 |
INF1 | Young developing inflorescences (5mm) | 31.6201 | 33.4525 | 34.911 | 31.0423 |
INF2 | Developing inflorescences (1-1.5 cm) | 32.3986 | 35.8683 | 30.6638 | 40.8481 |
ROO | Roots from the seedlings (10 cm shoot stage) | 9.16826 | 24.6031 | 16.0962 | 30.5788 |
NOD | Developing tillers at six leaf stage, 3rd internode | 24.6307 | 30.0162 | 21.8534 | 104.703 |
CAR5 | Developing grain, bracts removed (5 DPA) | 31.0714 | 29.8534 | 29.6318 | 33.7698 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.99891 | 3.91228 | 4.33441 | 10.45 |
CDS Structure of MLOC_36790
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_36790.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g61860.1 |
-2 |
0.0 |
877 |
477/573 (83%) |
13101.m06607 protein TBC domain containing protein, expressed |
TAIR PP10 |
AT3G55020.1 |
-2 |
0.0 |
643 |
357/593 (60%) |
Ypt/Rab-GAP domain of gyp1p superfamily protein | chr3:20389278-20394713 REVERSE LENGTH=777 |