MLOC_3679 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains601.776288.44297.471360.326
LEAShoots from the seedlings (10 cm shoot stage)170.23987.9707132.213106.85
INF1Young developing inflorescences (5mm)377.94460.305465.608347.952
INF2Developing inflorescences (1-1.5 cm)282.507296.569257.724292.399
ROORoots from the seedlings (10 cm shoot stage)441.832261.954241.981321.525
NODDeveloping tillers at six leaf stage, 3rd internode55.2168107.002123.701320.171
CAR5Developing grain, bracts removed (5 DPA)295.39327.285315.105287.516
CAR15Developing grain, bracts removed (15 DPA)133.75137.974113.735287.064



CDS Structure of MLOC_3679






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248954.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248954.1CUST_18628_PI427708080NoneNoneNone
MLOC_3679.4NoneAvailableAvailablecontig_132622 (Mapped)
MLOC_40952.1NoneAvailableNonecontig_2567264 (Mapped)
MLOC_48031.1NoneAvailableNonecontig_31647 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----