MLOC_36762 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3798250.2539720.1956720.289732
LEAShoots from the seedlings (10 cm shoot stage)0.5875331.672011.259680.950233
INF1Young developing inflorescences (5mm)0.1932620.261660.4787620.24934
INF2Developing inflorescences (1-1.5 cm)0.8710370.8547930.7210610.877233
ROORoots from the seedlings (10 cm shoot stage)3.994694.261632.845524.79717
NODDeveloping tillers at six leaf stage, 3rd internode0.5185210.602490.2039941.70276
CAR5Developing grain, bracts removed (5 DPA)0.3220180.4701570.2835670.349046
CAR15Developing grain, bracts removed (15 DPA)000.09511960.114527



CDS Structure of MLOC_36762






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36762.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_36762.2CUST_5157_PI427708083AvailableAvailablecontig_2547300 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g25170.1 +2 2e-43 158 83/168 (49%) 13112.m02552 protein NB-ARC domain containing disease resistance protein, putative, expressed
TAIR PP10None-----