- Predicted Gene MLOC_36756
MLOC_36756 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.66891 | 4.00436 | 5.7343 | 3.30625 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.83037 | 3.57165 | 4.73885 | 3.79519 |
INF1 | Young developing inflorescences (5mm) | 4.61675 | 7.50099 | 6.51746 | 3.86984 |
INF2 | Developing inflorescences (1-1.5 cm) | 9.08526 | 9.83627 | 9.85334 | 8.61739 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.19664 | 5.61235 | 3.14038 | 5.67332 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.35757 | 2.74505 | 4.9104 | 8.85733 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.6372 | 6.875 | 7.95435 | 5.01949 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.34316 | 3.37172 | 2.59839 | 5.79672 |
CDS Structure of MLOC_36756
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_36756.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g32880.1 |
-3 |
3e-16 |
78 |
33/47 (70%) |
13110.m19364 protein WD domain, G-beta repeat domain containing protein, expressed |
TAIR PP10 |
AT1G04510.2 |
-3 |
1e-11 |
63 |
28/47 (60%) |
| Symbols: MAC3A | MOS4-associated complex 3A | chr1:1226749-1230592 FORWARD LENGTH=523 |