MLOC_36756 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.668914.004365.73433.30625
LEAShoots from the seedlings (10 cm shoot stage)6.830373.571654.738853.79519
INF1Young developing inflorescences (5mm)4.616757.500996.517463.86984
INF2Developing inflorescences (1-1.5 cm)9.085269.836279.853348.61739
ROORoots from the seedlings (10 cm shoot stage)7.196645.612353.140385.67332
NODDeveloping tillers at six leaf stage, 3rd internode3.357572.745054.91048.85733
CAR5Developing grain, bracts removed (5 DPA)5.63726.8757.954355.01949
CAR15Developing grain, bracts removed (15 DPA)3.343163.371722.598395.79672



CDS Structure of MLOC_36756






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36756.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_36756.1CUST_12208_PI427708083AvailableAvailablecontig_2547289 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g32880.1 -3 3e-16 78 33/47 (70%) 13110.m19364 protein WD domain, G-beta repeat domain containing protein, expressed
TAIR PP10 AT1G04510.2 -3 1e-11 63 28/47 (60%) | Symbols: MAC3A | MOS4-associated complex 3A | chr1:1226749-1230592 FORWARD LENGTH=523