MLOC_36746 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.1811.386813.260412.0209
LEAShoots from the seedlings (10 cm shoot stage)10.22029.1749210.12368.11932
INF1Young developing inflorescences (5mm)8.3974710.245911.1567.75589
INF2Developing inflorescences (1-1.5 cm)8.196089.069328.215258.7854
ROORoots from the seedlings (10 cm shoot stage)10.431210.30948.044411.5624
NODDeveloping tillers at six leaf stage, 3rd internode10.39989.355399.998429.9118
CAR5Developing grain, bracts removed (5 DPA)7.711949.318058.355777.60146
CAR15Developing grain, bracts removed (15 DPA)3.160263.362713.993137.06045



CDS Structure of MLOC_36746






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36746.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_36746.1CUST_11409_PI427708080AvailableAvailablecontig_2547277 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g05900.1 +1 2e-159 456 228/257 (89%) 13106.m00585 protein methyltransferase, putative, expressed
TAIR PP10 AT2G30920.1 +1 2e-134 391 182/248 (73%) | Symbols: ATCOQ3, EMB3002, COQ3 | coenzyme Q 3 | chr2:13157409-13159824 REVERSE LENGTH=322