MLOC_36734 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.959414.084214.180716.1724
LEAShoots from the seedlings (10 cm shoot stage)8.587745.27747.037746.5297
INF1Young developing inflorescences (5mm)30.551933.04225.875427.1779
INF2Developing inflorescences (1-1.5 cm)19.947119.778519.465823.0509
ROORoots from the seedlings (10 cm shoot stage)11.592115.304617.22920.7318
NODDeveloping tillers at six leaf stage, 3rd internode0.3560740.4787551.073372.21999
CAR5Developing grain, bracts removed (5 DPA)13.722213.607414.400514.4605
CAR15Developing grain, bracts removed (15 DPA)3.797433.809282.560938.70858



CDS Structure of MLOC_36734






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36734.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370725NoneNoneNoneNone
MLOC_36734.1CUST_2311_PI427708080AvailableAvailablecontig_2547265 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g05090.1 +2 0.0 642 305/358 (85%) 13106.m00479 protein methyltransferase domain containing protein, expressed
TAIR PP10 AT1G04870.2 +2 1e-169 488 230/358 (64%) | Symbols: PRMT10, ATPRMT10 | protein arginine methyltransferase 10 | chr1:1373485-1375598 REVERSE LENGTH=383