MLOC_36731 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains127.36100.186123.182123.563
LEAShoots from the seedlings (10 cm shoot stage)105.91138.861573.057966.0217
INF1Young developing inflorescences (5mm)61.901173.297560.477360.345
INF2Developing inflorescences (1-1.5 cm)57.127572.774559.425874.9474
ROORoots from the seedlings (10 cm shoot stage)142.30290.548688.3901130.184
NODDeveloping tillers at six leaf stage, 3rd internode259.06256.434107.352756.355
CAR5Developing grain, bracts removed (5 DPA)72.947577.35477.332780.7931
CAR15Developing grain, bracts removed (15 DPA)7.598845.947058.8790917.344



CDS Structure of MLOC_36731






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36731.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250306.1NoneNoneNoneNone
MLOC_36731.1CUST_2310_PI427708080AvailableAvailablecontig_2547254 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g02840.1 -2 2e-126 367 195/197 (99%) 13102.m00240 protein ras-related protein, putative, expressed
TAIR PP10 AT2G17800.2 -2 2e-120 350 182/197 (92%) | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | Arabidopsis RAC-like 1 | chr2:7740313-7741942 FORWARD LENGTH=197