MLOC_36723 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.038915.555813.494612.8288
LEAShoots from the seedlings (10 cm shoot stage)6.536454.199563.937594.2498
INF1Young developing inflorescences (5mm)33.642528.760525.622323.3699
INF2Developing inflorescences (1-1.5 cm)22.09620.479721.019320.6481
ROORoots from the seedlings (10 cm shoot stage)6.2956611.735512.400213.2555
NODDeveloping tillers at six leaf stage, 3rd internode0.2265580.2194520.7535930.980911
CAR5Developing grain, bracts removed (5 DPA)17.615319.075418.200115.6224
CAR15Developing grain, bracts removed (15 DPA)5.919756.162074.298111.6901



CDS Structure of MLOC_36723






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36723.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_36723.1CUST_5152_PI427708083AvailableAvailablecontig_2547247 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g06980.1 +3 2e-46 171 87/94 (93%) 13103.m00769 protein nucleic acid binding protein, putative, expressed
TAIR PP10 AT3G07030.1 +3 5e-35 139 69/94 (73%) Alba DNA/RNA-binding protein | chr3:2223001-2225254 REVERSE LENGTH=405