- Predicted Gene MLOC_36713
MLOC_36713 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.29889 | 7.71781 | 9.30716 | 6.91157 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.57458 | 6.68909 | 9.74171 | 5.63866 |
| INF1 | Young developing inflorescences (5mm) | 3.9802 | 5.50027 | 4.61896 | 3.49703 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.49236 | 3.37787 | 2.57691 | 2.83784 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.52217 | 14.8328 | 9.66904 | 14.2593 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.50625 | 6.62366 | 7.61663 | 20.2221 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.16079 | 7.9725 | 8.06662 | 6.6138 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.41897 | 2.61136 | 3.19791 | 5.31516 |
CDS Structure of MLOC_36713
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_36713.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g38380.1 |
+1 |
0.0 |
632 |
335/402 (83%) |
13107.m03969 protein transmembrane protein 49, putative, expressed |
| TAIR PP10 |
AT1G05360.1 |
+1 |
6e-153 |
452 |
242/399 (61%) |
BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT4G14950.1); Has 332 Blast hits to 326 proteins in 115 species: Archae - 0; Bacteria - 11; Metazoa - 174; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). | chr1:1564816-1567278 FORWARD LENGTH=416 |