MLOC_36702 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.359435.677335.089643.9925
LEAShoots from the seedlings (10 cm shoot stage)57.690449.142831.277850.6729
INF1Young developing inflorescences (5mm)103.18696.831198.3397100.817
INF2Developing inflorescences (1-1.5 cm)119.409129.593116.065166.941
ROORoots from the seedlings (10 cm shoot stage)16.780518.85519.827235.4645
NODDeveloping tillers at six leaf stage, 3rd internode26.805330.516433.1704145.629
CAR5Developing grain, bracts removed (5 DPA)63.804960.03662.724577.2313
CAR15Developing grain, bracts removed (15 DPA)31.606130.908730.035585.3951



CDS Structure of MLOC_36702






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36702.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355733NoneNoneNoneNone
MLOC_36702.1CUST_2306_PI427708080AvailableAvailablecontig_2547213 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g40010.1 -2 0.0 646 411/659 (62%) 13103.m04335 protein DEK C terminal domain containing protein, expressed
TAIR PP10 AT5G55660.1 -2 4e-75 266 229/701 (33%) DEK domain-containing chromatin associated protein | chr5:22539375-22543142 FORWARD LENGTH=778