- Predicted Gene MLOC_36681
MLOC_36681 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_36681_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_36681_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.17669 | 11.2785 | 10.6761 | 9.00727 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.4285 | 8.98686 | 8.69447 | 8.2081 |
INF1 | Young developing inflorescences (5mm) | 28.978 | 26.9843 | 25.46 | 20.6016 |
INF2 | Developing inflorescences (1-1.5 cm) | 21.676 | 26.2562 | 23.6972 | 23.8331 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.86206 | 7.61934 | 5.80269 | 7.81835 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.08429 | 3.29852 | 6.07376 | 12.5696 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.5409 | 10.7943 | 11.9002 | 9.66301 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.99617 | 4.40299 | 4.21105 | 9.21874 |
CDS Structure of MLOC_36681
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_36681.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g41490.1 |
+1 |
0.0 |
1153 |
612/743 (82%) |
13104.m04071 protein DNA-directed RNA polymerase III subunit RPC1, putative, expressed |
TAIR PP10 |
AT5G60040.1 |
+1 |
0.0 |
788 |
434/746 (58%) |
| Symbols: NRPC1 | nuclear RNA polymerase C1 | chr5:24173590-24183269 FORWARD LENGTH=1376 |