- Predicted Gene MLOC_36669
MLOC_36669 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_36669_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_36669_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 27.5333 | 35.3766 | 29.6916 | 29.828 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 20.7268 | 23.0188 | 13.3121 | 15.1774 |
INF1 | Young developing inflorescences (5mm) | 57.069 | 56.2783 | 54.042 | 44.2929 |
INF2 | Developing inflorescences (1-1.5 cm) | 49.0828 | 43.8792 | 37.5796 | 46.6643 |
ROO | Roots from the seedlings (10 cm shoot stage) | 16.291 | 19.014 | 37.9266 | 22.981 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.67972 | 3.73031 | 6.07191 | 12.4238 |
CAR5 | Developing grain, bracts removed (5 DPA) | 19.1023 | 18.3765 | 15.5252 | 16.5185 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.12923 | 4.53474 | 3.37621 | 9.84388 |
CDS Structure of MLOC_36669
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_36669.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g14980.2 |
-2 |
4e-29 |
109 |
54/90 (60%) |
13101.m01657 protein RPA3 - Putative single-stranded DNA binding complex subunit 3, expressed |
TAIR PP10 |
AT3G52630.2 |
-2 |
1e-17 |
77 |
43/100 (43%) |
Nucleic acid-binding, OB-fold-like protein | chr3:19514184-19514596 FORWARD LENGTH=107 |