MLOC_36667 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains81.494793.069889.791588.359
LEAShoots from the seedlings (10 cm shoot stage)739.2981063.54994.103750.422
INF1Young developing inflorescences (5mm)53.193259.38652.047746.6086
INF2Developing inflorescences (1-1.5 cm)33.326739.244634.281438.7975
ROORoots from the seedlings (10 cm shoot stage)90.273881.815454.176990.272
NODDeveloping tillers at six leaf stage, 3rd internode177.884235.235330.131773.812
CAR5Developing grain, bracts removed (5 DPA)113.765117.095120.92110.452
CAR15Developing grain, bracts removed (15 DPA)30.950139.7528.231778.7087



CDS Structure of MLOC_36667






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36667.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248731.1NoneNoneNoneNone
MLOC_36667.1CUST_2301_PI427708080AvailableAvailablecontig_2547149 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g51410.1 +2 0.0 1783 901/968 (93%) 13101.m05364 protein glycine dehydrogenase, putative, expressed
TAIR PP10 AT4G33010.1 +2 0.0 1630 821/966 (85%) | Symbols: AtGLDP1, GLDP1 | glycine decarboxylase P-protein 1 | chr4:15926852-15931150 REVERSE LENGTH=1037