MLOC_36655 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.330425.548923.833323.1462
LEAShoots from the seedlings (10 cm shoot stage)22.889711.349610.607313.5277
INF1Young developing inflorescences (5mm)34.05335.208632.434828.8363
INF2Developing inflorescences (1-1.5 cm)39.382637.658834.786241.0664
ROORoots from the seedlings (10 cm shoot stage)21.000730.021822.354435.7585
NODDeveloping tillers at six leaf stage, 3rd internode18.848618.902311.726564.2374
CAR5Developing grain, bracts removed (5 DPA)54.816149.686351.803150.4306
CAR15Developing grain, bracts removed (15 DPA)32.660431.485929.460670.6561



CDS Structure of MLOC_36655






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36655.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374780NoneNoneNoneNone
MLOC_36655.1CUST_2299_PI427708080AvailableAvailablecontig_2547129 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g04110.2 -1 0.0 2175 1111/1195 (93%) 13109.m00335 protein coatomer alpha subunit, putative, expressed
TAIR PP10 AT1G62020.1 -1 0.0 1862 923/1200 (77%) Coatomer, alpha subunit | chr1:22919814-22923728 FORWARD LENGTH=1216