MLOC_36647 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.465232.654092.713022.33193
LEAShoots from the seedlings (10 cm shoot stage)4.060274.724284.476253.42563
INF1Young developing inflorescences (5mm)4.228475.469656.456593.82189
INF2Developing inflorescences (1-1.5 cm)3.899014.027725.920984.15507
ROORoots from the seedlings (10 cm shoot stage)3.218235.026835.441965.0477
NODDeveloping tillers at six leaf stage, 3rd internode4.532584.792245.2213715.3633
CAR5Developing grain, bracts removed (5 DPA)2.786162.725072.615912.251
CAR15Developing grain, bracts removed (15 DPA)1.753021.455621.42883.17741



CDS Structure of MLOC_36647






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36647.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_36647.2CUST_12203_PI427708083AvailableAvailablecontig_2547119 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g13360.2 -3 1e-177 516 250/323 (77%) 13108.m01428 protein kelch repeat protein, putative, expressed
TAIR PP10 AT1G51550.1 -3 2e-101 320 170/328 (52%) Kelch repeat-containing F-box family protein | chr1:19117646-19119291 REVERSE LENGTH=478