MLOC_36628 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.273886.731997.131627.09872
LEAShoots from the seedlings (10 cm shoot stage)7.126755.602236.285065.48981
INF1Young developing inflorescences (5mm)12.042211.398611.30549.7969
INF2Developing inflorescences (1-1.5 cm)10.26911.20999.6343311.6018
ROORoots from the seedlings (10 cm shoot stage)5.975187.764279.388149.33892
NODDeveloping tillers at six leaf stage, 3rd internode3.718623.713335.5091813.2798
CAR5Developing grain, bracts removed (5 DPA)8.132629.221499.221988.7277
CAR15Developing grain, bracts removed (15 DPA)2.897922.352642.087336.01343



CDS Structure of MLOC_36628






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36628.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_36628.1CUST_11383_PI427708080AvailableAvailablecontig_2547072 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g10790.1 -1 0.0 610 318/388 (82%) 13101.m01165 protein WD domain, G-beta repeat domain containing protein, expressed
TAIR PP10 AT5G45760.1 -1 6e-133 397 217/378 (57%) Transducin/WD40 repeat-like superfamily protein | chr5:18561121-18563005 FORWARD LENGTH=360