- Predicted Gene MLOC_36627
MLOC_36627 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.05084 | 12.0168 | 8.6799 | 9.75969 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.4109 | 5.36868 | 4.52978 | 8.03437 |
| INF1 | Young developing inflorescences (5mm) | 8.81043 | 5.99495 | 4.4289 | 5.68633 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.66382 | 3.37229 | 2.56365 | 3.2507 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.429289 | 2.17478 | 1.88157 | 2.45485 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.765827 | 0.667458 | 0.330025 | 2.24999 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.80089 | 5.81613 | 6.83738 | 6.21109 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.460657 | 0.333328 | 0.246033 | 0.871371 |
CDS Structure of MLOC_36627
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_36627.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g10800.1 |
+2 |
0.0 |
1749 |
844/1037 (81%) |
13101.m01166 protein pentatricopeptide, putative, expressed |
| TAIR PP10 |
AT4G18750.1 |
+2 |
0.0 |
815 |
417/795 (52%) |
| Symbols: DOT4 | Pentatricopeptide repeat (PPR) superfamily protein | chr4:10304850-10307465 FORWARD LENGTH=871 |