MLOC_3661 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 21.1599 | 13.0331 | 16.8141 | 17.6858 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 27.6656 | 46.736 | 71.5145 | 45.4547 |
| INF1 | Young developing inflorescences (5mm) | 10.1118 | 13.3976 | 12.5091 | 11.7855 |
| INF2 | Developing inflorescences (1-1.5 cm) | 10.0673 | 11.4124 | 11.8091 | 13.4267 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 37.5776 | 23.679 | 21.6115 | 33.8266 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 22.5647 | 40.5842 | 50.5611 | 128.067 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 31.448 | 31.6042 | 31.7827 | 35.3559 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.4156 | 5.96653 | 4.6243 | 14.6914 |
CDS Structure of MLOC_3661
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3661.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g63420.1 |
-3 |
1e-62 |
197 |
95/103 (92%) |
13103.m07030 protein OsGrx_S14 - glutaredoxin subgroup II, expressed |
| TAIR PP10 |
AT3G54900.1 |
-3 |
3e-52 |
170 |
77/103 (75%) |
| Symbols: CXIP1, ATGRXCP | CAX interacting protein 1 | chr3:20341850-20342371 REVERSE LENGTH=173 |
