MLOC_36574 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains92.417178.614677.465881.6218
LEAShoots from the seedlings (10 cm shoot stage)52.02523.952726.5729.2776
INF1Young developing inflorescences (5mm)56.603253.860153.905345.4776
INF2Developing inflorescences (1-1.5 cm)34.1539.478145.025142.7278
ROORoots from the seedlings (10 cm shoot stage)59.939477.999575.593190.3312
NODDeveloping tillers at six leaf stage, 3rd internode145.58677.572443.426244.12
CAR5Developing grain, bracts removed (5 DPA)58.688463.228462.40661.1284
CAR15Developing grain, bracts removed (15 DPA)11.831810.07389.093724.1193



CDS Structure of MLOC_36574






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36574.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359653NoneNoneNoneNone
MLOC_36574.2CUST_2284_PI427708080AvailableAvailablecontig_2546996 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g38610.1 -3 1e-97 290 163/177 (92%) 13105.m04054 protein clathrin adaptor complex small chain domain containing protein, expressed
TAIR PP10 AT3G09800.1 -3 9e-65 205 116/175 (66%) SNARE-like superfamily protein | chr3:3006731-3007916 REVERSE LENGTH=179