MLOC_36568 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains790.258571.364578.966702.94
LEAShoots from the seedlings (10 cm shoot stage)339.289192.536233.799235.866
INF1Young developing inflorescences (5mm)1029.46974.149935.299910.263
INF2Developing inflorescences (1-1.5 cm)668.527652.745834.173836.179
ROORoots from the seedlings (10 cm shoot stage)426.68677.781816.011937.758
NODDeveloping tillers at six leaf stage, 3rd internode88.237385.1017136.137319.694
CAR5Developing grain, bracts removed (5 DPA)529.174589.105484.063599.293
CAR15Developing grain, bracts removed (15 DPA)132.389121.74101.36310.96



CDS Structure of MLOC_36568






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36568.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367485NoneNoneNoneNone
MLOC_36568.1CUST_2283_PI427708080AvailableAvailablecontig_2546983 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g21480.1 +2 2e-61 193 112/124 (90%) 13106.m02300 protein 60S ribosomal protein L31, putative, expressed
TAIR PP10 AT5G56710.1 +2 7e-52 168 95/123 (77%) Ribosomal protein L31e family protein | chr5:22944003-22944767 REVERSE LENGTH=119