MLOC_36561 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.51623.399721.559716.6717
LEAShoots from the seedlings (10 cm shoot stage)17.728313.025118.050111.8641
INF1Young developing inflorescences (5mm)22.321118.195121.247513.571
INF2Developing inflorescences (1-1.5 cm)17.451519.470616.490616.3478
ROORoots from the seedlings (10 cm shoot stage)14.252217.124214.965915.868
NODDeveloping tillers at six leaf stage, 3rd internode14.597613.578110.777137.6263
CAR5Developing grain, bracts removed (5 DPA)21.63920.798122.336216.7406
CAR15Developing grain, bracts removed (15 DPA)10.816910.452310.787718.6973



CDS Structure of MLOC_36561






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36561.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_36561.1CUST_11371_PI427708080AvailableAvailablecontig_2546973 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g49260.1 +3 0.0 1078 543/612 (89%) 13107.m05292 protein importin subunit beta, putative, expressed
TAIR PP10 AT3G08960.1 +3 0.0 753 367/607 (60%) ARM repeat superfamily protein | chr3:2730405-2736762 REVERSE LENGTH=1010