MLOC_36535 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains24.717923.187324.576220.7601
LEAShoots from the seedlings (10 cm shoot stage)21.310324.376823.6317.42
INF1Young developing inflorescences (5mm)34.732835.365530.843623.8254
INF2Developing inflorescences (1-1.5 cm)29.768238.197633.518630.7698
ROORoots from the seedlings (10 cm shoot stage)17.804822.393621.403121.7068
NODDeveloping tillers at six leaf stage, 3rd internode16.624816.656323.283551.2621
CAR5Developing grain, bracts removed (5 DPA)30.891629.027227.490423.0485
CAR15Developing grain, bracts removed (15 DPA)4.638365.138838.625179.96586



CDS Structure of MLOC_36535






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36535.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_36535.1CUST_11369_PI427708080AvailableAvailablecontig_2546931 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g11060.2 -3 5e-74 231 132/147 (90%) 13107.m01139 protein expressed protein
TAIR PP10 AT5G19050.1 -3 7e-55 182 103/143 (72%) alpha/beta-Hydrolases superfamily protein | chr5:6369307-6371726 FORWARD LENGTH=361