MLOC_36534 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1010830.2364520.03938370.145896
LEAShoots from the seedlings (10 cm shoot stage)0.09228430.1988910.2771090.153704
INF1Young developing inflorescences (5mm)0.07322010.185910.0957170.0935574
INF2Developing inflorescences (1-1.5 cm)0.04381840.08357610.1755830.0937111
ROORoots from the seedlings (10 cm shoot stage)0.2244330.09222870.08649490.128419
NODDeveloping tillers at six leaf stage, 3rd internode00.01605320.00895250.060121
CAR5Developing grain, bracts removed (5 DPA)0.2359560.2207680.0573110.165521
CAR15Developing grain, bracts removed (15 DPA)0.0526007000.191863



CDS Structure of MLOC_36534






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36534.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_36534.1NoneAvailableAvailablecontig_2546931 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g04550.1 +3 3e-26 79 44/109 (40%) 13109.m00387 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----