MLOC_36521 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.653480.5407840.4379580.55898
LEAShoots from the seedlings (10 cm shoot stage)0.9770130.5734540.4512230.591528
INF1Young developing inflorescences (5mm)0.6799781.004420.6410660.703363
INF2Developing inflorescences (1-1.5 cm)0.671160.2700430.5710330.54001
ROORoots from the seedlings (10 cm shoot stage)0.2362760.7456310.9444850.843861
NODDeveloping tillers at six leaf stage, 3rd internode2.187231.99622.012736.389
CAR5Developing grain, bracts removed (5 DPA)0.0386455000.0347902
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_36521






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36521.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_36521.3CUST_5131_PI427708083AvailableAvailablecontig_2546915 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g10410.1 +1 2e-131 394 217/378 (57%) 13104.m00936 protein amidase, putative, expressed
TAIR PP10 AT4G34880.1 +1 5e-60 205 106/215 (49%) Amidase family protein | chr4:16615549-16617424 FORWARD LENGTH=466