- Predicted Gene MLOC_36518
MLOC_36518 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_36518_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_36518_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.523599 | 0.846222 | 0.996995 | 0.827394 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0.0299432 | 0.027756 |
INF1 | Young developing inflorescences (5mm) | 0.0175582 | 0.166526 | 0.134381 | 0.0945327 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.274378 | 0.626055 | 1.08681 | 0.675753 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.260315 | 0.102328 | 0.0620468 | 0.158649 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0429719 | 0.0165802 | 0.195174 |
CAR5 | Developing grain, bracts removed (5 DPA) | 14.8834 | 10.5112 | 10.6591 | 11.719 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.75309 | 1.83338 | 1.23627 | 3.91204 |
CDS Structure of MLOC_36518
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_36518.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g28850.1 |
+3 |
0.0 |
877 |
464/815 (57%) |
13107.m02893 protein retrotransposon protein, putative, unclassified, expressed |
TAIR PP10 |
AT1G48410.3 |
+3 |
0.0 |
825 |
443/842 (53%) |
| Symbols: AGO1 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | chr1:17886285-17891892 REVERSE LENGTH=1050 |