MLOC_36515 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.0038450700.0308693
CAR5Developing grain, bracts removed (5 DPA)0.0202657000.0187682
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_36515






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36515.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372904NoneNoneNoneNone
MLOC_36515.1CUST_6940_PI427708080AvailableAvailablecontig_2546909 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g18220.1 +3 0.0 970 509/606 (84%) 13103.m02182 protein pyruvate decarboxylase isozyme 2, putative, expressed
TAIR PP10 AT4G33070.1 +3 0.0 902 484/607 (80%) Thiamine pyrophosphate dependent pyruvate decarboxylase family protein | chr4:15952519-15954676 REVERSE LENGTH=607