MLOC_36500 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.609072.548044.225162.60769
LEAShoots from the seedlings (10 cm shoot stage)2.106942.381355.909662.34996
INF1Young developing inflorescences (5mm)000.04431730.0200309
INF2Developing inflorescences (1-1.5 cm)000.08059290.062776
ROORoots from the seedlings (10 cm shoot stage)7.47724.539594.563814.93381
NODDeveloping tillers at six leaf stage, 3rd internode0.3290290.3046910.3399470.797713
CAR5Developing grain, bracts removed (5 DPA)0.1083790.4246750.2856130.201118
CAR15Developing grain, bracts removed (15 DPA)00.12017800.202564



CDS Structure of MLOC_36500






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36500.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_36500.1CUST_17653_PI427708080AvailableAvailablecontig_2546891 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g13870.1 -1 3e-29 120 53/70 (76%) 13102.m01542 protein aquaporin protein, putative, expressed
TAIR PP10 AT4G18910.1 -1 3e-24 104 44/72 (61%) | Symbols: NIP1;2, NLM2, ATNLM2 | NOD26-like intrinsic protein 1;2 | chr4:10366211-10368179 FORWARD LENGTH=294