- Predicted Gene MLOC_36476
MLOC_36476 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_36476_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_36476_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.90013 | 5.1896 | 5.08461 | 4.24957 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.5396 | 2.93231 | 2.71524 | 2.8184 |
INF1 | Young developing inflorescences (5mm) | 12.3865 | 13.6127 | 13.1296 | 10.2959 |
INF2 | Developing inflorescences (1-1.5 cm) | 17.4424 | 16.5533 | 16.4573 | 17.4554 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.82735 | 4.59259 | 5.06702 | 4.90367 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.94394 | 2.81068 | 2.84641 | 9.08832 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.4459 | 9.96132 | 9.94057 | 9.20081 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.14951 | 1.66645 | 2.18359 | 4.24 |
CDS Structure of MLOC_36476
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_36476.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g36490.1 |
+3 |
0.0 |
1132 |
601/730 (82%) |
13110.m03304 protein HEAT repeat family protein, putative, expressed |
TAIR PP10 |
AT3G60740.1 |
+3 |
0.0 |
1365 |
755/1256 (60%) |
| Symbols: TTN1, EMB133, TFC D, CHO | ARM repeat superfamily protein | chr3:22447385-22453325 REVERSE LENGTH=1254 |