- Predicted Gene MLOC_36471
MLOC_36471 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1143.05 | 887.64 | 776.137 | 991.499 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 431.739 | 239.253 | 235.831 | 256.493 |
INF1 | Young developing inflorescences (5mm) | 1170.6 | 1238.87 | 1262.3 | 1120.27 |
INF2 | Developing inflorescences (1-1.5 cm) | 964.047 | 877.329 | 811.77 | 1046.38 |
ROO | Roots from the seedlings (10 cm shoot stage) | 663.025 | 575.969 | 757.807 | 756.051 |
NOD | Developing tillers at six leaf stage, 3rd internode | 57.8063 | 46.5342 | 124.983 | 197.335 |
CAR5 | Developing grain, bracts removed (5 DPA) | 359.683 | 330.943 | 359.018 | 370.312 |
CAR15 | Developing grain, bracts removed (15 DPA) | 93.3728 | 96.6515 | 85.6902 | 238.479 |
CDS Structure of MLOC_36471
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_36471.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g32920.1 |
+2 |
1e-93 |
283 |
139/140 (99%) |
13110.m02891 protein ribosomal protein, putative, expressed |
TAIR PP10 |
AT3G04400.1 |
+2 |
5e-93 |
280 |
137/140 (98%) |
| Symbols: emb2171 | Ribosomal protein L14p/L23e family protein | chr3:1167339-1168308 FORWARD LENGTH=140 |