MLOC_36463 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.656982.499521.581341.84656
LEAShoots from the seedlings (10 cm shoot stage)2.571932.248232.413171.75984
INF1Young developing inflorescences (5mm)4.679315.990065.513444.12679
INF2Developing inflorescences (1-1.5 cm)5.344575.514836.564095.81402
ROORoots from the seedlings (10 cm shoot stage)2.287233.002113.030672.78982
NODDeveloping tillers at six leaf stage, 3rd internode1.233871.072913.145843.70009
CAR5Developing grain, bracts removed (5 DPA)4.108834.771673.71783.80392
CAR15Developing grain, bracts removed (15 DPA)3.75082.566892.894717.02796



CDS Structure of MLOC_36463






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36463.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_36463.2CUST_17651_PI427708080AvailableAvailablecontig_2546849 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g05660.1 -2 4e-80 280 132/229 (58%) 13105.m00597 protein PWWP domain containing protein, expressed
TAIR PP10 AT5G27650.1 -2 9e-45 173 91/215 (42%) Tudor/PWWP/MBT superfamily protein | chr5:9785511-9789094 FORWARD LENGTH=1072