MLOC_36456 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.230994.484264.552424.77286
LEAShoots from the seedlings (10 cm shoot stage)2.31730.342220.3485240.91374
INF1Young developing inflorescences (5mm)7.394578.243598.291897.4638
INF2Developing inflorescences (1-1.5 cm)9.8943911.28699.0531712.0971
ROORoots from the seedlings (10 cm shoot stage)2.099992.844233.144993.64685
NODDeveloping tillers at six leaf stage, 3rd internode2.256995.692952.1126317.6003
CAR5Developing grain, bracts removed (5 DPA)6.732676.757297.064757.14869
CAR15Developing grain, bracts removed (15 DPA)0.7921760.5178220.7000491.67565



CDS Structure of MLOC_36456






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36456.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_36456.1CUST_11356_PI427708080AvailableAvailablecontig_2546833 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g59320.1 -2 0.0 632 329/369 (89%) 13104.m06251 protein protein kinase domain containing protein, expressed
TAIR PP10 AT3G19300.1 -2 1e-142 428 220/373 (59%) Protein kinase superfamily protein | chr3:6690242-6693210 REVERSE LENGTH=663