MLOC_3645 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.03253 | 3.09983 | 2.78496 | 3.37692 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.12295 | 0.133108 | 0.731201 | 1.19239 |
| INF1 | Young developing inflorescences (5mm) | 0.257665 | 0.281066 | 0.196097 | 0.235315 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.39356 | 0.855287 | 0.975106 | 0.884578 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 6.2609 | 5.0024 | 7.39838 | 7.37098 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.00375769 | 0 | 0.0364751 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.66567 | 2.89869 | 3.30165 | 3.21366 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.512356 | 0.37637 | 0.681131 | 1.24654 |
CDS Structure of MLOC_3645
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3645.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g61200.1 |
+2 |
2e-172 |
498 |
250/336 (74%) |
13101.m06513 protein GDSL-like lipase/acylhydrolase, putative, expressed |
| TAIR PP10 |
AT1G58430.1 |
+2 |
8e-87 |
277 |
149/321 (46%) |
| Symbols: RXF26 | GDSL-like Lipase/Acylhydrolase family protein | chr1:21711684-21712992 REVERSE LENGTH=360 |
