MLOC_36439 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains000.3872820.530139
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)3.83512.996885.165964.31451
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_36439






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36439.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_36439.1CUST_5124_PI427708083AvailableAvailablecontig_2546804 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g40720.1 +2 4e-67 208 94/132 (71%) 13110.m03775 protein expansin precursor, putative, expressed
TAIR PP10 AT1G65680.1 +2 2e-26 102 58/133 (44%) | Symbols: ATEXPB2, EXPB2, ATHEXP BETA 1.4 | expansin B2 | chr1:24427266-24428399 FORWARD LENGTH=273