- Predicted Gene MLOC_36420
MLOC_36420 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 131.181 | 122.997 | 132.812 | 126.325 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 60.1355 | 19.8756 | 28.3747 | 32.4066 |
| INF1 | Young developing inflorescences (5mm) | 94.7771 | 91.4253 | 105.244 | 77.7047 |
| INF2 | Developing inflorescences (1-1.5 cm) | 67.7813 | 81.2195 | 73.6227 | 82.2763 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 63.001 | 76.9492 | 75.379 | 90.2014 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 24.322 | 24.2436 | 22.6366 | 81.648 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 87.1311 | 93.0013 | 94.8395 | 90.4615 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 309.186 | 304.221 | 289.34 | 660.49 |
CDS Structure of MLOC_36420
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_36420.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g46580.1 |
+2 |
0.0 |
608 |
291/338 (86%) |
13105.m04977 protein polyprenyl synthetase, putative, expressed |
| TAIR PP10 |
AT5G47770.1 |
+2 |
0.0 |
517 |
245/340 (72%) |
| Symbols: FPS1 | farnesyl diphosphate synthase 1 | chr5:19345297-19347415 FORWARD LENGTH=384 |