- Predicted Gene MLOC_36393
MLOC_36393 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_36393_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_36393_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 13.7218 | 21.0808 | 20.745 | 18.6351 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 18.1131 | 12.401 | 11.7693 | 12.1333 |
INF1 | Young developing inflorescences (5mm) | 46.4118 | 44.2833 | 43.3758 | 35.9273 |
INF2 | Developing inflorescences (1-1.5 cm) | 40.3308 | 48.8981 | 39.1161 | 46.4233 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.32671 | 15.2793 | 10.5873 | 16.2999 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.39592 | 7.22283 | 10.2365 | 24.9172 |
CAR5 | Developing grain, bracts removed (5 DPA) | 25.0942 | 24.5117 | 23.1882 | 22.9093 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.52019 | 3.99226 | 4.99049 | 9.64348 |
CDS Structure of MLOC_36393
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_36393.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g10770.1 |
-3 |
0.0 |
1183 |
589/639 (92%) |
13109.m00952 protein OsTOP6B - Topoisomerase 6 subunit B, expressed |
TAIR PP10 |
AT3G20780.1 |
-3 |
0.0 |
984 |
489/640 (76%) |
| Symbols: ATTOP6B, BIN3, HYP6, RHL3, TOP6B | topoisomerase 6 subunit B | chr3:7264025-7268498 REVERSE LENGTH=670 |