MLOC_36391 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.374583.667353.478333.77122
LEAShoots from the seedlings (10 cm shoot stage)63.7929123.956104.47284.0095
INF1Young developing inflorescences (5mm)11.057317.738214.044513.168
INF2Developing inflorescences (1-1.5 cm)8.531418.786237.761689.95758
ROORoots from the seedlings (10 cm shoot stage)4.980466.087246.528527.44762
NODDeveloping tillers at six leaf stage, 3rd internode1.326421.243424.067225.48313
CAR5Developing grain, bracts removed (5 DPA)3.709574.361853.403254.11004
CAR15Developing grain, bracts removed (15 DPA)2.195421.440021.819614.59614



CDS Structure of MLOC_36391






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36391.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_36391.1CUST_11349_PI427708080AvailableAvailablecontig_2546737 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g10350.1 +1 0.0 720 385/487 (79%) 13102.m01150 protein MLO domain containing protein, putative, expressed
TAIR PP10 AT4G02600.2 +1 9e-146 441 234/455 (51%) | Symbols: MLO1, ATMLO1 | Seven transmembrane MLO family protein | chr4:1144141-1147156 FORWARD LENGTH=526