MLOC_3638 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.00511 | 4.51967 | 5.86434 | 5.62566 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.05463 | 6.87604 | 7.18205 | 5.68918 |
| INF1 | Young developing inflorescences (5mm) | 10.0449 | 14.8986 | 15.2305 | 12.9694 |
| INF2 | Developing inflorescences (1-1.5 cm) | 17.1371 | 19.876 | 19.3328 | 23.2229 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 15.2205 | 10.115 | 9.04645 | 12.7533 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 20.529 | 25.2786 | 37.3345 | 84.1964 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.87517 | 4.02548 | 4.33053 | 4.50238 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.04645 | 0.961714 | 1.15401 | 2.81545 |
CDS Structure of MLOC_3638
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3638.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g38120.1 |
-3 |
0.0 |
543 |
357/488 (73%) |
13105.m03984 protein homeodomain protein, putative, expressed |
| TAIR PP10 |
AT5G02030.1 |
-3 |
2e-72 |
249 |
146/284 (51%) |
| Symbols: LSN, PNY, HB-6, BLR, RPL, BLH9, VAN | POX (plant homeobox) family protein | chr5:395754-398872 FORWARD LENGTH=575 |
