MLOC_36364 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.376569.186719.00159.602
LEAShoots from the seedlings (10 cm shoot stage)6.049340.7590632.074252.55331
INF1Young developing inflorescences (5mm)13.967113.088111.702811.831
INF2Developing inflorescences (1-1.5 cm)16.194918.393117.062220.2844
ROORoots from the seedlings (10 cm shoot stage)7.613776.569415.277558.08981
NODDeveloping tillers at six leaf stage, 3rd internode1.144031.701720.2626954.87472
CAR5Developing grain, bracts removed (5 DPA)16.894816.203215.305216.7696
CAR15Developing grain, bracts removed (15 DPA)2.68192.145373.436216.56091



CDS Structure of MLOC_36364






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36364.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251567.1NoneNoneNoneNone
MLOC_36364.1CUST_2251_PI427708080AvailableAvailablecontig_2546689 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g60670.1 +3 0.0 1212 768/890 (86%) 13101.m06457 protein receptor-like protein kinase precursor, putative, expressed
TAIR PP10 AT3G56370.1 +3 0.0 702 492/916 (54%) Leucine-rich repeat protein kinase family protein | chr3:20899403-20902390 REVERSE LENGTH=964