MLOC_36363 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9195760.7016250.4365970.725616
LEAShoots from the seedlings (10 cm shoot stage)0.1701450.13718100.12841
INF1Young developing inflorescences (5mm)0.05640500.03601270.0402825
INF2Developing inflorescences (1-1.5 cm)0.060457400.1095390.0979644
ROORoots from the seedlings (10 cm shoot stage)14.804311.954918.721115.3632
NODDeveloping tillers at six leaf stage, 3rd internode00.0072336500.0543956
CAR5Developing grain, bracts removed (5 DPA)0.03803910.03623100.0417732
CAR15Developing grain, bracts removed (15 DPA)0.0260402000.0902818



CDS Structure of MLOC_36363






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36363.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376657NoneNoneNoneNone
MLOC_36363.1CUST_2250_PI427708080AvailableAvailablecontig_2546684 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g47990.1 +2 3e-169 481 237/291 (81%) 13107.m05126 protein peroxidase precursor, putative, expressed
TAIR PP10 AT5G05340.1 +2 5e-128 375 180/291 (62%) Peroxidase superfamily protein | chr5:1579142-1580819 REVERSE LENGTH=324