- Predicted Gene MLOC_36344
MLOC_36344 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 166.138 | 232.928 | 236.209 | 220.077 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 92.4879 | 76.6997 | 84.6387 | 75.5901 |
INF1 | Young developing inflorescences (5mm) | 68.0207 | 71.1389 | 61.1806 | 56.3659 |
INF2 | Developing inflorescences (1-1.5 cm) | 42.1247 | 52.2331 | 45.9093 | 50.8568 |
ROO | Roots from the seedlings (10 cm shoot stage) | 114.691 | 145.685 | 115.465 | 175.067 |
NOD | Developing tillers at six leaf stage, 3rd internode | 42.3091 | 35.5003 | 29.7406 | 121.982 |
CAR5 | Developing grain, bracts removed (5 DPA) | 95.2837 | 88.1458 | 95.6268 | 87.759 |
CAR15 | Developing grain, bracts removed (15 DPA) | 13.4969 | 12.6057 | 13.2558 | 28.9267 |
CDS Structure of MLOC_36344
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_36344.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g04410.1 |
+3 |
0.0 |
1687 |
850/939 (91%) |
13103.m00449 protein aconitate hydratase protein, putative, expressed |
TAIR PP10 |
AT2G05710.1 |
+3 |
0.0 |
1518 |
758/932 (81%) |
| Symbols: ACO3 | aconitase 3 | chr2:2141591-2146350 FORWARD LENGTH=990 |