- Predicted Gene MLOC_36338
MLOC_36338 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.05452 | 4.83589 | 3.47287 | 4.38438 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.71443 | 4.32183 | 3.21281 | 4.48529 |
| INF1 | Young developing inflorescences (5mm) | 8.77908 | 7.86167 | 8.14895 | 7.41447 |
| INF2 | Developing inflorescences (1-1.5 cm) | 13.8098 | 9.88324 | 9.83414 | 13.1776 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.277221 | 0.927713 | 0.885377 | 1.09641 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.41422 | 1.83048 | 3.01212 | 7.08042 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.1818 | 3.43745 | 3.34015 | 3.59549 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.358305 | 0.432505 | 0.453041 | 1.04023 |
CDS Structure of MLOC_36338
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_36338.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g11310.1 |
-1 |
0.0 |
830 |
448/588 (76%) |
13103.m01274 protein PPR repeat domain containing protein, putative, expressed |
| TAIR PP10 |
AT3G29290.1 |
-1 |
1e-150 |
455 |
235/446 (53%) |
| Symbols: emb2076 | Pentatricopeptide repeat (PPR) superfamily protein | chr3:11238421-11240125 FORWARD LENGTH=540 |